BCFtools 1.8 index
Creates index for bgzip compressed VCF/BCF files for random access. CSI (coordinate-sorted index) is created by default.
- To use BCFtools 1.8 index, import your data in bgzip format.
- Resources: https://github.com/samtools/bcftools
Use SRR946914.vcf.gz from the directory above as test input.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Use all default parameters
Expect SRR946914.vcf.gz.csi as output.