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Compute the coverage of a feature file among a genome.
- To use BEDTools genomeCoverageBed, import your data in BED format.
- Resources: http://code.google.com/p/bedtools/
Use b.bed and my.genome from the directory above as test input.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Default parameters only, no further configuration needed.
Expect bedtools_genomecov_output as output.