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Final filter in mutant identification 1 pipeline (Workflow:Mutant Identification 1) using awk to print columns 2, 3, 4 and 1 if line doesn't contain X. Also contains a substitution for removal of %
- To use Final filter2, import your data in text file format.
- Resources: http://www.gnu.org/software/gawk/manual/gawk.html
Use the file above as test input.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Default parameters only, no further configuration needed.
Expect a text file named Final_mutant_specific_homozygotes.txt after the input files as output.