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Currently, the CyVerse users can publish data directly to the NCBI Sequence Read Archive (SRA) . Other repositories are planned, but no release dates are set. and the NCBI Whole Genome Shotgun (WGS) archive. To suggest additional repositories to publish to, use our forum contact us.

To submit your files directly from CyVerse to the SRA, see the Submissions instructions.
NCBI Sequence Read Archive (SRA) Submission (Workflow Tutorial).

To submit your files directly from CyVerse to WGS archive, see the NCBI Whole Genome Shotgun (WGS) Submission Tutorial - (currently beta).