Picante

Picante functions for analyzing the phylogenetic and trait diversity of ecological communities, comparative analyses, and the display and manipulation of phenotypic and phylogenetic data.

Quick Start

• To use Picante, upload your data in R format.
• Resources: documentation

Test Data

Input File(s)

All files are located in the Community Data directory of the iPlant Discovery Environment at the following path:

Community Data > iplantcollaborative > example_data > picante

• Use test_comm.tre, test_comm.traits, test_comm.sample, picante.wrap.R from as test input files.

Parameters Used in App

When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.

• Default parameters only, no further configuration needed.

Output File(s)

Expect a txt file as output.

Tool Source for App

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