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DATA STORE USER MANUAL
 

 

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Because CyVerse products are interdependent with iRODS iCommands and iRODS products such as FUSE, the instructions for downloading iCommands vary according to your OS.

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linux
linux

Note
titleIMPORTANT! -- BEFORE YOU UPGRADE

Before upgrading to a 4.1 version, see Upgrading to iRODS 4.1 to view the list of services and testing done on the affected CyVerse offerings.

The most recent supported version for use with most CyVerse services is iRODS 4.1.10.

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titleNot sure which version you have?

To find the version you have installed, use ienv to find the client version or imiscsvrinfo to find the server version.

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Code Block
titleCode for RHEL/CentOS
languagebash
yum install https://files.renci.org/pub/irods/releases/4.1.10/centos6/irods-icommands-4.1.10-centos6-x86_64.rpm

Next , continue to Step 2 to configure iCommands.

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Unprivileged Install
Unprivileged Install
Installation for Unprivileged Users

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  1. Download the correct installer.

    Tip
    titlealternate installers compatible with performance enhanced FUSE client

    If you intend to heavily use the iRODS FUSE client, it requires version 4.1.9 of the iCommands to be installed. Here are the installers for this version.

  2. From a terminal window, run the installer with  sh .

    For example, if you were installing iCommands on an Ubuntu 14.04 system as the user cyverse-user, you would do something like the following example. The iCommands would end up being placed in the directory /home/cyverse-user/icommands.

    Code Block
    prompt> sh irods-icommands-4.1.10-ubuntu14.installer
    Where would you like to install it? [/home/cyverse-user] 
    Expanding contents under /home/cyverse-user.
    Updating .bashrc
    done!
    
    To make the changes take effect in the current shell, please source your bashrc file, i.e., enter either `. ~/.bashrc`. or `bash`.

    Important: To make the changes take effect in the current shell, you will need to source your .bashrc file by entering either `. ~/.bashrc` .

  3. Open a new terminal window, if necessary, and run ienv to check that the new version was installed.

  4. Continue to Step 2 to configure iCommands.

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mac
mac
Mac OS

Warning

This Mac OS installer was tested for iCommands 4.1.9 compatibility with Mac OS 10.9 to 10.11 only.

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  1. Download the   Mac OS X iCommands 4.1.9 installer .
  2. Find the downloaded package, hold down the control button, and select the downloaded package.
  3. Click Open to give permission for Mac to open the package.
  4. Use the installer and follow the instructions .
  5. Open a new terminal window, if necessary, and run ienv to check that the new version was installed.
  6. Continue to Step 2 to configure iCommands.

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other
other
Microsoft Windows

iRODS does not currently offer a 4.1 download for Windows users. If you are running Windows 10, iCommands can be run on the Linux subsystem. See  https://docs.microsoft.com/en-us/windows/wsl/install-win10 for information on installing the Linux subsystem. Then follow the iCommands for Linux instructions to install iCommands.

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configure
configure
Step 2: Initialize/start the iRODS connection and configure the settings (One-time only or after changing your configuration)

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When done, log out of the Data Store (especially important if on a shared or public computer) by entering iexit full. (To log back in on the same device, enter iinit.)
After you are successfully connected, you do not need to reenter your password to use the CyVerse Data Store from that computer unless you log out.

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AdvConfig
AdvConfig
Show If
groupStaff
GreenAnchor Anchor = AdvConfig (visible to Staff only)   Advanced configuration settings (for power users only)

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bgColorLightYellow
titleFOR POWER USERS ONLY
borderColorred
borderWidth2px

The following settings allow power users to apply more advanced configuration settings for iRODS, but may be safely ignored by others.

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