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kapeelc@vm64-125:~/sleuth_analysis$ ls -lh
total 8.0K
-rw-r--r-- 1 kapeelc iplant-everyone  138 Jul 10 20:45 design_matrix
drwxr-x--- 8 kapeelc iplant-everyone 4.0K Jul 10 20:44 kallisto_qaunt_output


Section 2: Using R studio on atmosphere to do the interactive analysis using


Sleuth R package

  1.  On the command line type below three commands to start a Rstudio and enter your Cyverse password. This will install all the dependencies needed to start Rstudio.