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LEARNING MATERIALS

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Code Block
$ cat *tsv > merged_iprscan_output.tsv

 

4.3 Run BLAST-P with MAKER annotated proteins against uniprot database

Code Block
$ mkdir blastp; cd blastp
$ makeblastdb -in uniprot_sprot.fasta -dbtype prot
$ blastp -db uniprot_sprot.fasta -query test.all.maker.proteins.fasta -out maker2uni.blastp -evalue .000001 -outfmt 6 -num_alignments 1 -seg yes -soft_masking true -lcase_masking -max_hsps_per_subject 1