LRmapqtl

Owned by mhelmke
Last updated: Jun 03, 2015 by kkennedy
1 min read

LRmapqtl

LRmapqtl fits the data to a simple linear regression model.

Quick Start

  • To use LRmapqtl, upload your data in the same format as the output Rcross. LRmapqtl also requires a molecular map in the same format as Rmap outputs.
  • Resources: documentation

Test Data

All files are located in the Community Data directory of the iPlant Discovery Environment at the following path:

Community Data > iplantcollaborative > example_data > lrmapqtl

Input File(s)

  • Use qtlcart.cro file as input.
  • Use qtlcart.map file as input.

Parameters Used in App

When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.

  • Default parameters only, no further configuration needed.

Output File(s)

  • Expect qtlcart.Ir as output.
  • Expect qtlcart.log and qtlcart.rc as output.

Tool Source for App