1KP_11MAR11

Agenda

  • Review OneKp Phyloinformatics Pipeline Wiki 
    • Thoughts on how to expand descriptions
    • Report target dates and progress on wiki?
    • Gene annotation?
  • Progress reports
    • Assemblies (Norm)
    • Hmm-based sorting of scaffolds/contigs (Norm, Mike G.)
    • Ks Plots (Mike B.)
    • BLAST portal (Mike G.) 
    • Portal for searching terms of best BLAST hits (e.g.prototype) (Mike G. and Raj)
  • Gene family tree estimation - AAs vs nucs?
  • Action Items for next two weeks