2011 Events

Title	Type	Date	Location	Notes
Workshop on Comparative Genomics	Workshop	Jan. 9-21	Ceský Krumlov, Czech Republic	Invited Faculty, Sheldon McKay, Title: "The iPlant Collaborative: Cyberinfrastructure for the Plant Sciences"
New York University	Seminar	Jan. 10	New York, NY	Seminar by Ann Stapleton, Host: Michael Purugganan, /wiki/spaces/COM/pages/242164286 Title: "What can iPlant do for me right now?"
Iowa State University	Seminar	Jan. 12	Ames, IA	Seminar by Steve Goff, Host: Volker Brendel, Collaborators: Volker Brendel, Pat Schnable, Bill Beavis, Thomas Lubberstedt, Jode Edwards, Steve Cannon, Carolyn Lawrence, Erik Vollbrecht Title: “Heterosis, Protein Metabolism, and Energy Efficiency: How Cyberinfrastructure Can Be Applied"
Integrated Breeding Platform	Meeting	Jan 14.	San Diego, CA	Signed MOU
PAG 2011	Conference	Jan. 15-19	San Diego, CA	iPlant Activities at PAG XIX including DNASubway Workshop, iPlant Presentation Title: "The iPlant Collaborative: Cyberinfrastructure for the Plant Sciences"
Colorado State University	Seminar	Jan. 22	Fort Collins, CO	Seminar by Ann Stapleton, Host: Pat Bedinger, /wiki/spaces/COM/pages/242164306 Title: "What can iPlant do for me right now?"
Human Vision and Electronic Imaging	Conference	Jan. 24	San Francisco, CA	Mini-workshop on bioinformatics visualization
University of Florida	Seminar	Jan. 25	Gainsville, FL	Seminar by Steve Goff, Host: Pam Soltis, Collaborators: Pam Soltis, Brad Barbazuk, Doug Soltis, Gordon Burleigh, Melanie Correll; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
UA School of Information: Science, Technology, and Arts Seminar	Seminar	Jan. 31	Tucson, AZ	Seminar by Steve Goff, Host: Clayton Morrison; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
SDCI-CoManage	Workshop	Feb. 1	Tucson, AZ	Tech Review for CoManage
Breeding Common Bean Annual Meeting	Seminar	Feb. 16	Tucson, AZ	Seminar by Steve Goff, Host: Phil McLean; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
IRODs Developer Meeting	Meeting	Feb. 16-18	Chapel Hill, NC	Rion Dooley attended
University of Kentucky	Seminar	Feb. 18	Lexington, KY	Seminar by Steve Goff, Host: Joe Chappell; Title: “Heterosis, Protein Metabolism, and Energy Efficiency: How Cyberinfrastructure Can Be Applied"
iPlant Developer Meeting	Meeting	Feb. 20-23	Tucson, AZ	Organizer: Matthew Vaughn
Geospatial Information Systems	Workshop	Feb. 24	Tucson, AZ	Kickoff meeting for working group
Genomics In Education	Workshop	Feb. 25-26	Tucson, AZ	DNA Subway Workshop
Rice Unviersity, U of Houston, and Texas Southern	Seminar	Feb. 25	Houston, TX	Visit by Ann Stapleton, Host: Michael Covington, Janet Braam, /wiki/spaces/COM/pages/242164294 Title: "What can iPlant do for me right now?"
U of Illinois, Urbana-Champaine	Seminar	Mar. 6-8	Urbana, IL	Seminar by Steve Goff, Host: C. Richard Johnson; Title: “Heterosis, Protein Metabolism, and Energy Efficiency: How Cyberinfrastructure Can Be Applied"
GMOD Spring Training	Workshop	Mar. 8-12	Durham, NC	Invited Instructor, Sheldon McKay presented Title: "The iPlant Collaborative: Cyberinfrastructure for the Plant Sciences"
Noble Foundation	Seminar-Industry	Mar. 9-11	Ardmore, OK	Seminar by Steve Goff, Host: Michael Udvardi Title: “Heterosis, Protein Metabolism, and Energy Efficiency: How Cyberinfrastructure Can Be Applied"
University of Missouri, Columbia	Seminar	Mar. 13-15	Columbia, MO	Seminars by Steve Goff and Eric Lyons, Host: James Birchler, Collaborators: James Birchler, Chris Pires, David Braun, Paula McSteen; Goff Title: "The iPlant Collaborative: Cyberinfrastructure for the plant science community" Lyons Title: "Comparative Genomics with CoGe in the iPlant Discovery Environment"
Portland State University	Seminar	Mar. 14	Portland, OR	Seminar by Ann Stapleton, Host: Suzanne Estes, Potential Collaborator: Todd Mockler Title: "What can iPlant do for me right now?"
Iowa State University	Seminar	Mar. 16	Ames, IA	Seminar by Eric Lyons, Host Volker Brendel, Carolyn Lawrence; Title: "Comparative Genomics with CoGe in the iPlant Discovery Environment"
University of Guelph	Seminar	Mar. 16	Guelph, ONT	Seminar by Steve Goff, Host: Lewis Lukens, Clarence Swanton; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
iPlant Metrics	Meeting	Mar. 25	Wilmington, NC	EMEC-hosted meeting to ID metrics for measuring success/progress
/wiki/spaces/notes/pages/242107184	Meeting	Mar. 27-28	Atlanta, GA	In-person working group meeting
WEB 2.0 Expo	Conference	Mar. 28-31	San Francisco, CA	Seung-jin Kim attended
University of Arkansas	Seminar	Apr. 1	Fayetteville, AR	Invited talk to Walton College by Sue Brown, Title: "Cyberinfrastructure: What’s in it for MIS?”
iRODS CodeSprint	Workshop	Apr. 12-14	Tucson, AZ	Developer meeting for iRODS
TeraGrid Meeting	Meeting	Apr. 13-15	Pittsburgh, PA	Dan Stanzione attended
Data-Intensive Analysis, Analytics, and Informatics	Workshop	Apr. 14-15	Seattle, WA	Dan Stanzione attended
Genomics In Education	Workshop	Apr. 15-16	Greensboro, NC	DNA Subway Workshop
Cornell University	Seminar	Apr. 17-19	Ithaca, NY	iPlant Training Workshop led by Matthew Vaughn, Title: "An Overview of the iPlant Discovery Environment"
UC Berkeley	Seminar	Apr. 19	Berkeley, CA	Seminar and Training on CoGe/iPlant by Eric Lyons, Host: Mike Freehling Title: "Comparative Genomics with CoGe in the iPlant Discovery Environment"
East Carolina University	Seminar	Apr. 21	Greenville, NC	Seminar by Ann Stapleton, Host: Beth Thompson, Collaborators: Beth Thompson, Jinling Huang, Ashley Egan Title: "What can iPlant do for me right now?"
/wiki/spaces/Events/pages/242199846	Conference	May 2-6	Madison, WI	Juan Antonio Raygoza Garay attended and presented poster; Ann Hari Haefele attended; Ray's Poster Title: "Enabling Plant Sciences Research Through iPlant's Discovery Environment and Condor"
Dow AgroSciences	Seminar-Industry	May 2	Indianapolis, IN	Seminar by Steve Goff, Host: Dennis Merens; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
Genomics In Education	Workshop	May 6-7	Bowie, MD	DNA Subway Workshop
International Parallel and Distributed Processing Symposium	Conference	May 14-22	Anchorage, AK	Dan Stanzione attended
Genome Assembly	Training Workshop	May 17-20	Cold Spring Harbor, NY	CSHL-sponsored Workshop, Matthew Vaughn presented, Title: "Roadblocks to genome assemblies"
Syngenta	Seminar-Industry	May 18	Research Triangle Park, NC	Seminar by Steve Goff; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
Cornell Next Gen Sequence Analysis Tools	Training Workshop	May 23-Jun 1	Ithaca, NY	Machine image contributed by Sangeeta Kuchimanchi, Contacts: Chi Sun, Robert Bukowski
Ontario Institute for Cancer Research	Seminar	Jun. 3	Toronto, ON	Seminar by Sheldon McKay, Host: Lincoln Stein Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
SSWAP	Training Workshop	Jun. 6	St. Johns, NM	Intro to Semantic Web technology
Arabidopsis Genome Research Meeting	Meeting	Jun. 6-10	Tucson, AZ	Dan Stanzione attended
Postdoc Tool Integration	Training Workshop	Jun. 6-8	Tucson, AZ	UAT for TiTo
Anthropod Genomics Symposium	Conference	Jun. 10-13	Kansas City, KS	Sheldon McKay, Invited workshop host, Title: "Comparative Genomics and the iPlant Discovery Environment"
Genomics In Education	Workshp	Jun. 10-11	Buffalo, NY	DNA Subway Workshop
PhytoBisque CodeSprint	Workshop	Jun. 14	Tucson, AZ	Developer meeting for PhytoBisque
Evolution 2011	Conference	Jun. 17-21	Norman, OK	Presentation by Naim Matasci Title: "The iPlant Tree of Life Project and Toolkit: Building a Cyberinfrastructure for Plant Science Research"
iEvoBio	Conference	Jun. 21-22	Norman, OK	Presentation by Jamie Estill, Title: "The iPlant Tree Reconciliation Tool" Presentation by Naim Matasci, Title: "The TNRS: a Taxanomic Name Resolution Service for Plants"
Arabidopsis 2011	Conference	Jun. 22-24	Madison, WI	Poster by Vicki Bryan, Steering Committee meeting attended by Dan Stanzione; Poster Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
Society for Experimental Biology 2011	Conference	Jun. 29-Jul. 4	Glasgow, Scotland	Dan Stanzione presented, Title: "The iPlant Collaborative: Cyberinfrastructure for the Plant Sciences"
Frontiers and Techniques in Plant Science	Workshop	Jul. 1-21	Cold Spring Harbor, NY	CSHL-sponsored Workshop, Course taught using iPlant Infrastrcture (Machine images contributed by Nathan, Edgar, Matt)
BASF	Seminar-Industry	Jul. 6	Research Triangle Park, NC	Seminar by Steve Goff, Host: Jeremy Erickson; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
Genomics In Education	Workshop	Jul. 7-8	St. Louis, MO	DNA Subway Workshop
BSA 2011	Conference & Training Workshop	Jul. 9-10	St. Louis, MO	iPlant Activities at BSA'11, including DNASubway Workshop, iPlant Workshop with CIPRES, and TNRS Poster Uwe Hilgert Title: "Genomics in Education: The DNASubway", Martha Narro Title: "The iPlant Collaborative Seed Projects", Eric Lyons Title: "Comparative Genomics and the iPlant Discovery Environment", Matt Vaughn Title: "Tool Integration in the Discovery Environment", Naim Matasci Title: "The TNRS: a Taxanomic Name Resolution Service for Plants", Steve Goff Title: "The iPlant Collaborative: Cyberinfrastructure for the Plant Sciences", Sheldon McKay Title: "Comparative Genomics and the iPlant Discovery Environment"
Workshop on Comparative Genomics	Workshop	Jul. 10-23	Fort Collins, CO	Invited Faculty, Sheldon McKay Title: "Comparative Genomics and the iPlant Discovery Environment"
University of Florida	Seminar	Jul. 15	Gainseville, FL	Sheldon presented seminar. Hosts: Doug and Pam Soltis "The iPlant Collaborative: Cyberinfrastructure for the Plant Sciences"
Smithsonian Institute	Seminar	Jul. 15	Washington, D.C.	Seminar on iPlant and iPToL by Naim Matasci, Host: Vicki Funk, Cindy Parr (discussed with Vicki about participation in iPlant activities, discussed with Cindy convergence of TNRS and EOL phylogenies) "The iPlant Tree of Life Project and Toolkit: Building a Cyberinfrastructure for Plant Science Research"
/wiki/spaces/Events/pages/242199831	Visit	Jul. 18	Tucson, AZ	One-day visit by NSF Program Officer
/wiki/spaces/Events/pages/242199745	Conference	Jul. 18-21	Salt Lake City, UT	iPlant Activities at TG'11 Giving Presentations: Rion Dooley - An API to feed the World, 10-12 PM, Tues, July 19 Matt Hanlon etal. -Benefits of NoSQL Databases for Portals & Science Gateways,2:45 - 5:15, Wed. July 20 Attending Tutorials: Sangeeta K - Global Federated File System/REST API Tutorial Andy L - Building Science Gateway Applications/REST API Sriramu S - New User Tutorial/REST API Tutorial Michael G - New User Tutorial/REST API Tutorial - cancelled Nirav M - Global Federated File System/Genesis II Install, Config, Mgmt Kris H - New User Tutorial/REST API Tutorial TACC Attendees: Matthew Hanlon, Rion Dooley, Stephen Mock, Maytal Dahan, Praveen Nuthulapati, Patrick Hurley, Dan Stanzione
ASPB 2011	Conference	Aug. 6-9	Minneapolis, MN	iPlant Activities at ASPB'11, Steve Goff, Martha Narro, Eric Lyons, Naim Matasci, Liya Wang, Christos Noutsos, Chunlao Tang, and Matt Vaughn attended; Presentation: Introduction, Overview, DE, Tool Integration, Data Management and Atmosphere (Eric Lyons) Presentation: Phylogenetic Workflows: Tree Building and Post-tree Analysis (Naim Matasci) Poster: A Data Analysis Pipeline for Next Generation Sequencing of DNA Methylome (Chunlao Tang) Poster: A QTL/GWAS workflow in the iPlant Discovery Environment (Liya Wang) Poster: Evolution of Regulatory Stress Responses in Duplicated Arabidopsis Gene (Christos Noutsos)
Oregon State University	Seminar	Aug. 9	Corvallis, OR	Visit by Ann Stapleton, Host: John Fowler Title: "What can iPlant do for you right now?"
q-bio	Conference	Aug. 10-14	Santa Fe, NM	Poster presented by Juan Raygoza; Title: "Enabling Quatitative Biology Through iPlant's Discovery Environment: The case of tool integration"
University of Oregon	Seminar	Aug. 11	Eugene, OR	Visit by Ann Stapleton, Host: Alice Barkan Title: "What can iPlant do for you right now?"
SolCAP and Potato Breeders Association	Meeting	Aug. 14	Wilmington, NC	Ann Stapleton met with the executive committee to go over iPlant resources relevant to SolCAP. Collaborator: Robin Buell
/wiki/spaces/Events/pages/242199539	Conference	Aug. 16-18	Warwick, England	Poster by Naim Matasci; Title: "Using R to Empower a New Plant Biology"
BioExtract/Carol Lushbough	Visit	Aug. 25	Tucson, AZ	Discussed collaboration with BioExtract
IBP-iPlant	Meeting	Aug. 28	Tucson, AZ	Meeting re: Embedding IBP Developer at iPlant
Colorado State University	Seminar	Aug. 31	Fort Collins, CO	Seminars by Steve Goff, Host: Tom Holzer; Title: “Heterosis, Protein Metabolism, and Energy Efficiency: How Cyberinfrastructure Can Be Applied" and Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
University of Hawai'i, Manoa	Seminar	Sept. 12	Manoa, HI	Seminar by Steve Goff, Host: Gernot Presting; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
Virginia Tech Integration & Visualization	Training Workshop	Sept. 12-14	Blacksburg, VA	Integration of Visualization Tools to answer biological questions, Host: Ruth Grene, attended by Dan Stanzione, Christos Noutsos, Matt Vaughn
EU Bioinformatics Summer School	Training Workshop	Sept. 15	Lake Lucerne, Switzerland	Attended by Matt Vaughn
Organismal Biology for Adaptive Processes	Workshop	Sept. 19-20	Arlington, VA	NSF future research directions workshop
University of Oklahoma	Seminar	Sept. 30	Norman, OK	Invited talk by Sue Brown, Title: "Diversity and Media Use: A Case Study of the iPlant Collaborative”
UA Ecology and Evoluntionary Biology Seminar	Seminar	Oct. 4	Tucson, AZ	Seminar by Naim Matasci, Title: "The iPlant Collaborative: A Cyberinfrastructure for the Life Sciences"
Genomics in Education	Workshop	Oct. 11-12	Riverside, CA	DNA Subway Workshop
Genotype-to-Phenotye: Deriving Biological Knowledge from Large Genomic Datasets	Workshop	Oct. 16-19	Cold Spring Harbor, NY	CSHL-sponsored Workshop, Steve Goff attended
TDWG 2011	Conference	Oct. 16-21	New Orleans, LA	Naim Matasci and Bill Peil presented TNRS Title: "The TNRS: a Taxanomic Name Resolution Service for Plants"
Nomina IX	Conference	Oct. 21 - 23	New Orleans, LA	Naim Matasci and Zhenyuan Lu attended
BIEN NCEAS Working Group	Meeting	Oct. 24-28	Santa Barbara, CA	Seed Project Working Group Meeting
UA Plant Sciences Seminar	Seminar	Oct. 24	Tucson, AZ	Seminar by Steve Goff, Campus Location: Marley 230 @ 4 PM; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
Genomics In Education	Workshop	Oct. 28-29	Roslindale, MA	DNA Subway Workshop
Genome Informatics	Conference	Nov. 2-5	Cold Spring Harbor, NY	Joshua Stein poster: "Genome and transcriptome assembly workflows and evaluation using the iPlant cyberinfrastructure" Christos Noutsos poster: "Atmosphere---iPlant collaborative’s cloud computing service for the plant sciences" Liya Wang poster: "A QTL/GWAS workflow integrated in iPlant discovery environment"
Intrexon	Seminar	Nov. 7	Research Triangle Park, NC	Steve Goff presentation; Title: “The iPlant Collaborative: Cyberinfrastructure for the plant science community"
Geospatial Code Sprint	Meeting	Nov. 8-9	Tucson, AZ	Internal code sprint
SSWAP Use Cases	Meeting	Nov. 10-11	Tucson, AZ	Internal use case meeting
Genomics In Education	Workshop	Nov. 11-12	Lonestar College, Kingwood Texas	DNA Subway Workshop
SC11	Conference	Nov. 12-18	Seattle, WA	Presentations: Edwin Skidmore, Title: "iPlant Atmosphere: A Gateway to Cloud Infrastructure for the Plant Sciences", Andy Lenards, Title: "Building an environment to faciliatate discoveries for plant sciences", Rion Dooley, Title: "The iPlant Foundational API"
Tools and Services Workshop @ NESCent	Training Workshop	Nov. 15 - 16	Durham, NC	iPlant Phylogenetics Workshop to introduce NESCent, UNC, and other faculty and staff to iPlant's software/infrastructure for sequence analysis and phylogenetics
Tools and Services Workshop @ Iowa State	Training Workshop	Nov. 17-18	Ames, IA	For Volker Brendel's Course at Iowa State
Genome Literacy Workshop at NHGRI	Meeting	Nov. 18	Rockville, MD	Dave Micklos presented on DNA Subway and the iPlant Collaborative, Title: "Genomics in Education: The DNASubway"
Fourth International Barcode of Life Conference	Conference	Nov. 28-Dec. 3	Adelaide, South Australia, AUS	Dave Micklos presented on DNA Subway and the iPlant Collaborative, Title: "Genomics in Education: The DNASubway"
/wiki/spaces/Events/pages/242199732	Meeting	Nov. 28-29	Tucson, AZ	Planning meeting for IBP with CYMMIT and Efficio representatives.
/wiki/spaces/Events/pages/242199662	Training Workshop	Nov. 30	Cold Spring Harbor, NY	DE RNAseq and Phylogenetics workflows and other topics. Held in conjunction with CSHL meeting Plant Genomes and Biotechnology. Joshua Stein, Jason Williams, Liya Wang, Christos Noutsos, Jerry Lu, Sheldon McKay, Doreen Ware, Chunlao Tang, Uwe Hilgert, Cornel Ghiban, Mohammed Khalfan, Workshop page is here. Planning page is here.
Plant Genomes & Biotechnology: From Genes to Networks	Meeting	Nov. 30 - Dec. 3	Cold Spring Harbor, NY	Sheldon McKay talk presentation during "Current Major Funding Initiatives" session. Jerry Lu poster: "iPlant's TNRS: a taxonomic name resolution services for plants" Naim Matasci poster: "The iPlant Collaborative---A cyberinfrastructure to support next-generation phylogeny-based research" Christos Noutsos poster: "Atmosphere---A cloud computing offered from iPlant collaborative to the Plant science community" Joshua Stein poster: "Genome and transcriptome assembly workflows and evaluation using the iPlant cyberinfrastructure" Liya Wang poster: "A QTL/GWAS workflow in iPlant Discovery Environment"
Tree Biology Seed Project	Meeting	Dec. 6	Tucson, AZ	Seed Project Working Group Meeting
CSS 2011 & Seed Expo	Conference	Dec. 7 - 9	Chicago, IL	Steve Goff presenting on iPlant/Heterosis/Molecular Breeding; Title: “Heterosis, Protein Metabolism, and Energy Efficiency: How Cyberinfrastructure Can Be Applied"
Tools and Services Workshop @ Michigan State	Workshop	Dec. 8-9	East Lansing, NY	Trainers: Matt Vaughn and Fusheng Wei
Tools and Services Workshop @ UA	Workshop	Dec. 16 & 20	Tucson, AZ	Trainers: Eric Lyons, Nirav Merchant (if available)

2011 Events (https://www.google.com/fusiontables/DataSource?snapid=S3693202VE1) Red= Conference Blue = Meeting Yellow = Seminar Green = Training/workshop
2011 Events America

2011 Events Europe

2011 Events Oceania