04-28-2015

Owned by wenchen
Last updated: Apr 28, 2015Version comment
1 min read

Done:

1, trim adapter;

2, send the trimmed files into iPlant;

3, bowtie2 mapping (ongoing)

4, finished the introduction for the final project.

Plan:

1, bedtools coverage to find the overlap between siRNA and each genomic loci;

2, write a small python script to count each group: different sizes of siRNAs, different origin.

3, further work on the final project.

Question:

Any software as replacement for counting?