iPlant Software Integration Tutorial, Iowa State University
Organizers |
|
|---|---|
Administrative Assistance |
|
Date |
May 13-14, 2013 |
Meeting Location |
124 Kildee Hall |
Particpants |
Resources
- JOIN.ME SCREEN SHARE https://join.me/463-627-161 (Updated throughout the session)
- This Wiki: http://bit.ly/10tsuz2
- iPlant Trellis User Management
- TACC User Portal
- iPlant Discovery Environment
Recommended Software
- Browser (in order): Firefox, Safari, Chrome
- SSH Client: PuTTY (Windows) or built-in client (Mac OS X/Linux)
- Java 1.7+ runtime installed
Goals of this Workshop
- Students will gain understanding of iPlant cyberinfrastructure offerings
- Students will understand how to integrate scientific code into the iPlant infrastructure using
- Atmosphere
- Discovery Environment
- Foundation API
- Students will integrate selected tools using the DE and API
Agenda
Day One
Time |
Session |
Misc |
|---|---|---|
09:00-09:20 |
Introduction to the iPlant Project |
|
09:20-09:30 |
Sort into work groups |
|
09:30-09:40 |
Sign up for TACC accounts |
|
09:40-10:00 |
Using iPlant Technologies (DE and API) |
|
10:00-10:15 |
Break |
Whew! |
10:15-10:30 |
Using iPlant Technologies (Atmosphere) |
|
10:30-12:00 |
Tutorial: Integrating tools into the iPlant DE |
|
12:00-1:00 |
Lunch |
|
1:00-3:30 |
Students perform DE tool integration |
|
3:30-4:00 |
Student group demo session |
Day Two
Time |
Session |
Misc |
|---|---|---|
9:00-9:15 |
Foundation API Overview |
|
9:15-10:00 |
Introduction to Lonestar and iRODS icommands |
|
10:00-10:10 |
Break |
|
10:10-12:00 |
Foundation API Usage Tutorial |
|
12:00-1:00 |
Lunch |
|
1:00-2:00 |
Foundation API Development Tutorial |
|
2:00-3:30 |
Students perform API tool integration |
|
3:30-4:00 |
Tying the API to the Discovery Environment |
Demonstration |